Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC35,92■■■■□ 3,34
Shroom2A2ALU4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Gm7291-201ENSMUST00000199147 382 ntBASIC35,91■■■■□ 3,34
Shroom2A2ALU4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC35,91■■■■□ 3,34
Shroom2A2ALU4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC35,9■■■■□ 3,34
Shroom2A2ALU4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC35,9■■■■□ 3,34
Shroom2A2ALU4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Gm21168-201ENSMUST00000199646 1096 ntBASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Shroom2A2ALU4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Shroom2A2ALU4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Shroom2A2ALU4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Shroom2A2ALU4 Gm6139-201ENSMUST00000079261 882 ntBASIC35,86■■■■□ 3,33
Shroom2A2ALU4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC35,86■■■■□ 3,33
Shroom2A2ALU4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC35,86■■■■□ 3,33
Shroom2A2ALU4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC35,86■■■■□ 3,33
Shroom2A2ALU4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
Shroom2A2ALU4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
Shroom2A2ALU4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC35,84■■■■□ 3,33
Shroom2A2ALU4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC35,84■■■■□ 3,33
Shroom2A2ALU4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC35,83■■■■□ 3,33
Shroom2A2ALU4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC35,83■■■■□ 3,33
Shroom2A2ALU4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC35,83■■■■□ 3,33
Shroom2A2ALU4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC35,82■■■■□ 3,32
Shroom2A2ALU4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC35,82■■■■□ 3,32
Shroom2A2ALU4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Gm5874-201ENSMUST00000096101 508 ntBASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Shroom2A2ALU4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Gm4419-202ENSMUST00000226239 1431 ntBASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC35,8■■■■□ 3,32
Shroom2A2ALU4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC35,79■■■■□ 3,32
Shroom2A2ALU4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC35,79■■■■□ 3,32
Shroom2A2ALU4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC35,79■■■■□ 3,32
Shroom2A2ALU4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC35,78■■■■□ 3,32
Shroom2A2ALU4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC35,78■■■■□ 3,32
Shroom2A2ALU4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC35,78■■■■□ 3,32
Shroom2A2ALU4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Shroom2A2ALU4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Shroom2A2ALU4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC35,77■■■■□ 3,32
Shroom2A2ALU4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC35,77■■■■□ 3,32
Shroom2A2ALU4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC35,76■■■■□ 3,32
Shroom2A2ALU4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC35,76■■■■□ 3,31
Shroom2A2ALU4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC35,76■■■■□ 3,31
Shroom2A2ALU4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC35,75■■■■□ 3,31
Shroom2A2ALU4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC35,75■■■■□ 3,31
Shroom2A2ALU4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC35,75■■■■□ 3,31
Shroom2A2ALU4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC35,74■■■■□ 3,31
Shroom2A2ALU4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC35,74■■■■□ 3,31
Shroom2A2ALU4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC35,74■■■■□ 3,31
Shroom2A2ALU4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Shroom2A2ALU4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC35,73■■■■□ 3,31
Shroom2A2ALU4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC35,72■■■■□ 3,31
Shroom2A2ALU4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC35,72■■■■□ 3,31
Shroom2A2ALU4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC35,72■■■■□ 3,31
Shroom2A2ALU4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC35,72■■■■□ 3,31
Shroom2A2ALU4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC35,72■■■■□ 3,31
Shroom2A2ALU4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC35,71■■■■□ 3,31
Shroom2A2ALU4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC35,71■■■■□ 3,31
Shroom2A2ALU4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC35,71■■■■□ 3,31
Shroom2A2ALU4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC35,7■■■■□ 3,31
Shroom2A2ALU4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Shroom2A2ALU4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Shroom2A2ALU4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Shroom2A2ALU4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC35,67■■■■□ 3,3
Shroom2A2ALU4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC35,67■■■■□ 3,3
Shroom2A2ALU4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC35,67■■■■□ 3,3
Shroom2A2ALU4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC35,66■■■■□ 3,3
Shroom2A2ALU4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC35,66■■■■□ 3,3
Shroom2A2ALU4 Gm10399-202ENSMUST00000202768 748 ntBASIC35,66■■■■□ 3,3
Shroom2A2ALU4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC35,66■■■■□ 3,3
Shroom2A2ALU4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC35,66■■■■□ 3,3
Shroom2A2ALU4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC35,66■■■■□ 3,3
Shroom2A2ALU4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC35,65■■■■□ 3,3
Shroom2A2ALU4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC35,65■■■■□ 3,3
Shroom2A2ALU4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC35,65■■■■□ 3,3
Shroom2A2ALU4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC35,65■■■■□ 3,3
Shroom2A2ALU4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC35,64■■■■□ 3,3
Shroom2A2ALU4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC35,64■■■■□ 3,3
Shroom2A2ALU4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC35,63■■■■□ 3,29
Shroom2A2ALU4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC35,63■■■■□ 3,29
Shroom2A2ALU4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC35,62■■■■□ 3,29
Shroom2A2ALU4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC35,62■■■■□ 3,29
Shroom2A2ALU4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC35,62■■■■□ 3,29
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms