Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm3854A0A1B0GSS6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Gm3854A0A1B0GSS6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3854A0A1B0GSS6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3854A0A1B0GSS6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3854A0A1B0GSS6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Gm3854A0A1B0GSS6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm3854A0A1B0GSS6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3854A0A1B0GSS6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3854A0A1B0GSS6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3854A0A1B0GSS6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3854A0A1B0GSS6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3854A0A1B0GSS6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Gm3854A0A1B0GSS6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3854A0A1B0GSS6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.92■■□□□ 1.1
Gm3854A0A1B0GSS6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.91■■□□□ 1.1
Gm3854A0A1B0GSS6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm3854A0A1B0GSS6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm3854A0A1B0GSS6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm3854A0A1B0GSS6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm3854A0A1B0GSS6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Gm3854A0A1B0GSS6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3854A0A1B0GSS6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3854A0A1B0GSS6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm3854A0A1B0GSS6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Gm3854A0A1B0GSS6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3854A0A1B0GSS6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3854A0A1B0GSS6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm3854A0A1B0GSS6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3854A0A1B0GSS6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3854A0A1B0GSS6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3854A0A1B0GSS6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3854A0A1B0GSS6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Gm3854A0A1B0GSS6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm3854A0A1B0GSS6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3854A0A1B0GSS6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm3854A0A1B0GSS6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm3854A0A1B0GSS6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm3854A0A1B0GSS6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.83■■□□□ 1.09
Gm3854A0A1B0GSS6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.83■■□□□ 1.09
Gm3854A0A1B0GSS6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm40881-201ENSMUST00000223397 166 ntBASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3854A0A1B0GSS6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3854A0A1B0GSS6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.81■■□□□ 1.08
Gm3854A0A1B0GSS6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3854A0A1B0GSS6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms