Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb8A0A140LI48 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Gm16437-201ENSMUST00000025669 507 ntBASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhgb8A0A140LI48 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Pcdhgb8A0A140LI48 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb8A0A140LI48 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb8A0A140LI48 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.46■□□□□ 0.71
Pcdhgb8A0A140LI48 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb8A0A140LI48 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb8A0A140LI48 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb8A0A140LI48 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb8A0A140LI48 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb8A0A140LI48 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb8A0A140LI48 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb8A0A140LI48 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb8A0A140LI48 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb8A0A140LI48 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb8A0A140LI48 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb8A0A140LI48 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb8A0A140LI48 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb8A0A140LI48 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb8A0A140LI48 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb8A0A140LI48 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb8A0A140LI48 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb8A0A140LI48 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhgb8A0A140LI48 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Gm12366-201ENSMUST00000121722 873 ntBASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Gm5786-201ENSMUST00000085368 882 ntBASIC19.38■□□□□ 0.69
Pcdhgb8A0A140LI48 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb8A0A140LI48 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb8A0A140LI48 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb8A0A140LI48 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms