Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Gm13241-201ENSMUST00000094493 780 ntBASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.18■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv3-4A0A0A6YXF1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv3-4A0A0A6YXF1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm22238-201ENSMUST00000175222 88 ntBASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm9847-201ENSMUST00000052528 599 ntBASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms