Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav18A0A075B656 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav18A0A075B656 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav18A0A075B656 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav18A0A075B656 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav18A0A075B656 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav18A0A075B656 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav18A0A075B656 Gm22567-201ENSMUST00000175542 342 ntBASIC17.77■□□□□ 0.44
Trav18A0A075B656 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav18A0A075B656 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav18A0A075B656 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav18A0A075B656 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav18A0A075B656 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav18A0A075B656 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav18A0A075B656 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav18A0A075B656 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav18A0A075B656 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.76■□□□□ 0.43
Trav18A0A075B656 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav18A0A075B656 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav18A0A075B656 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav18A0A075B656 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav18A0A075B656 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav18A0A075B656 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav18A0A075B656 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trav18A0A075B656 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.75■□□□□ 0.43
Trav18A0A075B656 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav18A0A075B656 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav18A0A075B656 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav18A0A075B656 Gm6311-201ENSMUST00000073790 878 ntBASIC17.73■□□□□ 0.43
Trav18A0A075B656 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav18A0A075B656 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav18A0A075B656 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav18A0A075B656 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav18A0A075B656 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav18A0A075B656 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav18A0A075B656 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav18A0A075B656 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.71■□□□□ 0.43
Trav18A0A075B656 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav18A0A075B656 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.71■□□□□ 0.42
Trav18A0A075B656 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav18A0A075B656 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav18A0A075B656 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav18A0A075B656 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.69■□□□□ 0.42
Trav18A0A075B656 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.69■□□□□ 0.42
Trav18A0A075B656 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav18A0A075B656 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav18A0A075B656 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav18A0A075B656 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.68■□□□□ 0.42
Trav18A0A075B656 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav18A0A075B656 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.67■□□□□ 0.42
Trav18A0A075B656 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms