Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-1A0A075B644 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Trav13-1A0A075B644 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav13-1A0A075B644 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav13-1A0A075B644 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.33■□□□□ 0.05
Trav13-1A0A075B644 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13-1A0A075B644 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-1A0A075B644 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-1A0A075B644 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-1A0A075B644 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-1A0A075B644 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-1A0A075B644 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-1A0A075B644 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-1A0A075B644 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-1A0A075B644 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-1A0A075B644 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms