Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
H2afb2S4R1M3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
H2afb2S4R1M3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Gm25948-201ENSMUST00000175334 112 ntBASIC14□□□□□ -0.17
H2afb2S4R1M3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14□□□□□ -0.17
H2afb2S4R1M3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb2S4R1M3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14□□□□□ -0.17
H2afb2S4R1M3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms