Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H2afb3S4R1G7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Gm20553-201ENSMUST00000204205 844 ntBASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb3S4R1G7 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.58□□□□□ -0.39
H2afb3S4R1G7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb3S4R1G7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm2810-201ENSMUST00000118681 990 ntBASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm15467-201ENSMUST00000120582 445 ntBASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb3S4R1G7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms