Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Crlf3Q9Z2L7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Gm45747-201ENSMUST00000212203 999 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf3Q9Z2L7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.14□□□□□ -0.15
Crlf3Q9Z2L7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms