Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip2Q9Z0H8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Gm14928-201ENSMUST00000120198 477 ntBASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clip2Q9Z0H8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Clip2Q9Z0H8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gm6912-201ENSMUST00000117218 544 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gm8927-201ENSMUST00000181978 981 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gm37917-201ENSMUST00000194711 392 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Gm3222-201ENSMUST00000071282 990 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip2Q9Z0H8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Gm15240-201ENSMUST00000118156 720 ntBASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Gm13385-201ENSMUST00000121089 220 ntBASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Mir497b-201ENSMUST00000093601 125 ntBASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clip2Q9Z0H8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip2Q9Z0H8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip2Q9Z0H8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip2Q9Z0H8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Clip2Q9Z0H8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip2Q9Z0H8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms