Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Gm27516-201ENSMUST00000184237 98 ntBASIC16.32■□□□□ 0.2
Scn11aQ9R053 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.32■□□□□ 0.2
Scn11aQ9R053 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.32■□□□□ 0.2
Scn11aQ9R053 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm27847-201ENSMUST00000183711 107 ntBASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm27375-201ENSMUST00000183799 107 ntBASIC16.31■□□□□ 0.2
Scn11aQ9R053 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.31■□□□□ 0.2
Scn11aQ9R053 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn11aQ9R053 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn11aQ9R053 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.3■□□□□ 0.2
Scn11aQ9R053 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Gm16177-201ENSMUST00000120728 718 ntBASIC16.3■□□□□ 0.2
Scn11aQ9R053 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn11aQ9R053 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.29■□□□□ 0.2
Scn11aQ9R053 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm27682-201ENSMUST00000183930 110 ntBASIC16.29■□□□□ 0.2
Scn11aQ9R053 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.29■□□□□ 0.2
Scn11aQ9R053 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.29■□□□□ 0.2
Scn11aQ9R053 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn11aQ9R053 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.28■□□□□ 0.2
Scn11aQ9R053 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn11aQ9R053 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.28■□□□□ 0.2
Scn11aQ9R053 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn11aQ9R053 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn11aQ9R053 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn11aQ9R053 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms