Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prg4Q9JM99 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prg4Q9JM99 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm11524-201ENSMUST00000119349 807 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm19078-201ENSMUST00000206311 727 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.72□□□□□ -0.37
Prg4Q9JM99 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prg4Q9JM99 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.71□□□□□ -0.37
Prg4Q9JM99 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prg4Q9JM99 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prg4Q9JM99 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prg4Q9JM99 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Prg4Q9JM99 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prg4Q9JM99 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.71□□□□□ -0.38
Prg4Q9JM99 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prg4Q9JM99 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.7□□□□□ -0.38
Prg4Q9JM99 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Prg4Q9JM99 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.7□□□□□ -0.38
Prg4Q9JM99 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.7□□□□□ -0.38
Prg4Q9JM99 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prg4Q9JM99 Mir7654-201ENSMUST00000185082 70 ntBASIC12.7□□□□□ -0.38
Prg4Q9JM99 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms