Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Pck2-205ENSMUST00000226352 2784 ntBASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Gm27646-201ENSMUST00000183989 110 ntBASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Gm43347-201ENSMUST00000200226 580 ntBASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ube4bQ9ES00 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gm27459-201ENSMUST00000184860 107 ntBASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gm34391-201ENSMUST00000203706 907 ntBASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube4bQ9ES00 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms