Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Acot6-202ENSMUST00000222921 3622 ntBASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tubb3Q9ERD7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Gm17837-201ENSMUST00000186435 985 ntBASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubb3Q9ERD7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tubb3Q9ERD7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tubb3Q9ERD7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tubb3Q9ERD7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tubb3Q9ERD7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tubb3Q9ERD7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms