Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp8Q9DB85 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp8Q9DB85 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp8Q9DB85 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp8Q9DB85 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp8Q9DB85 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm15376-201ENSMUST00000122258 783 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm26464-201ENSMUST00000157094 305 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm10478-201ENSMUST00000084451 396 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Gm6091-201ENSMUST00000098307 165 ntBASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rrp8Q9DB85 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp8Q9DB85 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm13392-201ENSMUST00000117708 150 ntBASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm14660-201ENSMUST00000119809 575 ntBASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.64□□□□□ -0.23
Rrp8Q9DB85 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms