Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Gm2445-201ENSMUST00000182798 989 ntBASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Gm37714-201ENSMUST00000194742 342 ntBASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Gm6916-202ENSMUST00000205523 195 ntBASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp4bQ9D8B3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm14701-201ENSMUST00000117156 348 ntBASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm33320-201ENSMUST00000192232 530 ntBASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm29741-201ENSMUST00000192667 421 ntBASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp4bQ9D8B3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm12428-201ENSMUST00000119844 727 ntBASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4bQ9D8B3 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Gm27533-201ENSMUST00000183800 152 ntBASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4bQ9D8B3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms