Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Gm11543-201ENSMUST00000120758 370 ntBASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.48■□□□□ 0.39
Chmp5Q9D7S9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Gm37644-201ENSMUST00000192190 2270 ntBASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp5Q9D7S9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms