Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 AA414768-201ENSMUST00000121924 1257 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm18489-201ENSMUST00000172565 551 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm2451-201ENSMUST00000199447 999 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm10290-201ENSMUST00000200451 999 ntBASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3a3Q9D554 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gm14042-201ENSMUST00000120139 833 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gm5682-201ENSMUST00000173402 505 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gm18246-201ENSMUST00000221023 728 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.15□□□□□ -0.14
Sf3a3Q9D554 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms