Protein–RNA interactions for Protein: Q9D548

Zcchc13, Cellular nucleic acid binding protein 2, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc13Q9D548 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Ntrk2-209ENSMUST00000225950 2640 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm45667-201ENSMUST00000210380 1316 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm14767-201ENSMUST00000121559 586 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm3809-201ENSMUST00000180973 1006 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm2445-201ENSMUST00000182798 989 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm37714-201ENSMUST00000194742 342 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm6916-202ENSMUST00000205523 195 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Gm9229-201ENSMUST00000222777 126 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 AC149294.4-201ENSMUST00000227870 882 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 CT030704.2-201ENSMUST00000228887 494 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Zcchc13Q9D548 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Gm15889-202ENSMUST00000212669 2443 ntBASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Zcchc13Q9D548 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gm13616-201ENSMUST00000120600 222 ntBASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Mir1897-201ENSMUST00000122581 272 ntBASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gm27680-201ENSMUST00000184192 160 ntBASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gm5425-201ENSMUST00000214125 459 ntBASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Shd-206ENSMUST00000225145 998 ntBASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Zcchc13Q9D548 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms