Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc130Q9D516 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.09□□□□□ -0.15
Ccdc130Q9D516 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.09□□□□□ -0.15
Ccdc130Q9D516 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc130Q9D516 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc130Q9D516 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Gm11745-201ENSMUST00000121669 448 ntBASIC14.08□□□□□ -0.16
Ccdc130Q9D516 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Gm37230-201ENSMUST00000194491 818 ntBASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.08□□□□□ -0.16
Ccdc130Q9D516 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc130Q9D516 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc130Q9D516 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms