Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Mir1894-201ENSMUST00000122802 81 ntBASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm2495-201ENSMUST00000191160 466 ntBASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gm17794-201ENSMUST00000220252 955 ntBASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.63■□□□□ 0.25
Stag1Q9D3E6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Stag1Q9D3E6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Gm15376-201ENSMUST00000122258 783 ntBASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.62■□□□□ 0.25
Stag1Q9D3E6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gm4984-201ENSMUST00000115987 360 ntBASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gm26464-201ENSMUST00000157094 305 ntBASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gm27772-201ENSMUST00000184900 187 ntBASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.61■□□□□ 0.25
Stag1Q9D3E6 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms