Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssbp3Q9D032 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Ssbp3Q9D032 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Gm15393-201ENSMUST00000120499 219 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Gm24694-201ENSMUST00000180054 110 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Gm27663-201ENSMUST00000184839 110 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Gm20445-201ENSMUST00000061905 565 ntBASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssbp3Q9D032 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Syt7-205ENSMUST00000224135 1557 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.67□□□□□ -0.54
Ssbp3Q9D032 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms