Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Gm8318-201ENSMUST00000182954 872 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.25□□□□□ -0.45
Pfdn1Q9CWM4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn1Q9CWM4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms