Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.48□□□□□ -0.57
Prpf8Q99PV0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.48□□□□□ -0.57
Prpf8Q99PV0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm8062-201ENSMUST00000139696 444 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm17795-201ENSMUST00000214505 757 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm15460-201ENSMUST00000118147 391 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm18905-201ENSMUST00000205454 928 ntBASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prpf8Q99PV0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Gm4984-201ENSMUST00000115987 360 ntBASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prpf8Q99PV0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Gm12390-201ENSMUST00000117897 397 ntBASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Snora78-201ENSMUST00000158630 128 ntBASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Gm18307-201ENSMUST00000206864 949 ntBASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Gm9257-201ENSMUST00000221254 232 ntBASIC11.46□□□□□ -0.58
Prpf8Q99PV0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prpf8Q99PV0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.45□□□□□ -0.58
Prpf8Q99PV0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Prpf8Q99PV0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms