Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.72□□□□□ -0.21
Trim16Q99PP9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim16Q99PP9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22065-201ENSMUST00000103753 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22066-201ENSMUST00000103761 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24932-201ENSMUST00000103763 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24115-201ENSMUST00000103799 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22190-201ENSMUST00000103827 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22191-201ENSMUST00000103831 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24721-201ENSMUST00000103849 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm28018-201ENSMUST00000103869 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm26399-201ENSMUST00000103937 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25349-201ENSMUST00000177728 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm23616-201ENSMUST00000177797 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25871-201ENSMUST00000177816 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24752-201ENSMUST00000178240 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.71□□□□□ -0.21
Trim16Q99PP9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim16Q99PP9 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.71□□□□□ -0.22
Trim16Q99PP9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.71□□□□□ -0.22
Trim16Q99PP9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim16Q99PP9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.7□□□□□ -0.22
Trim16Q99PP9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.7□□□□□ -0.22
Trim16Q99PP9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.7□□□□□ -0.22
Trim16Q99PP9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms