Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gtf2ird2Q99NI3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm9522-201ENSMUST00000182394 926 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gtf2ird2Q99NI3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf2ird2Q99NI3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf2ird2Q99NI3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms