Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem2Q99NH8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trem2Q99NH8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.23□□□□□ -0.13
Trem2Q99NH8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.23□□□□□ -0.13
Trem2Q99NH8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Gm8410-201ENSMUST00000117225 605 ntBASIC14.23□□□□□ -0.13
Trem2Q99NH8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.23□□□□□ -0.13
Trem2Q99NH8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem2Q99NH8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.22□□□□□ -0.13
Trem2Q99NH8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.22□□□□□ -0.13
Trem2Q99NH8 Gm27680-201ENSMUST00000184192 160 ntBASIC14.22□□□□□ -0.13
Trem2Q99NH8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Gm43575-201ENSMUST00000196420 516 ntBASIC14.22□□□□□ -0.13
Trem2Q99NH8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem2Q99NH8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trem2Q99NH8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.22□□□□□ -0.13
Trem2Q99NH8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm4804-201ENSMUST00000182234 999 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm27430-201ENSMUST00000184585 107 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm44333-201ENSMUST00000197168 107 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm46209-201ENSMUST00000217912 553 ntBASIC14.21□□□□□ -0.13
Trem2Q99NH8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trem2Q99NH8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms