Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.29□□□□□ -0.44
Scrt1Q99M85 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.28□□□□□ -0.44
Scrt1Q99M85 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.28□□□□□ -0.44
Scrt1Q99M85 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.28□□□□□ -0.44
Scrt1Q99M85 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.28□□□□□ -0.44
Scrt1Q99M85 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Scrt1Q99M85 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scrt1Q99M85 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Gm12341-201ENSMUST00000119724 503 ntBASIC12.27□□□□□ -0.45
Scrt1Q99M85 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Gm19220-201ENSMUST00000222682 803 ntBASIC12.27□□□□□ -0.45
Scrt1Q99M85 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.27□□□□□ -0.45
Scrt1Q99M85 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.27□□□□□ -0.45
Scrt1Q99M85 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.27□□□□□ -0.45
Scrt1Q99M85 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm13464-201ENSMUST00000119418 935 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm27701-201ENSMUST00000184498 110 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms