Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.16■□□□□ 0.18
Smc1bQ920F6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.16■□□□□ 0.18
Smc1bQ920F6 Gm45453-201ENSMUST00000211758 853 ntBASIC16.16■□□□□ 0.18
Smc1bQ920F6 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.16■□□□□ 0.18
Smc1bQ920F6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.16■□□□□ 0.18
Smc1bQ920F6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.15■□□□□ 0.18
Smc1bQ920F6 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.15■□□□□ 0.18
Smc1bQ920F6 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.15■□□□□ 0.18
Smc1bQ920F6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Smc1bQ920F6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smc1bQ920F6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Smc1bQ920F6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Gm12742-201ENSMUST00000117326 410 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Gm45841-201ENSMUST00000207700 164 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.14■□□□□ 0.17
Smc1bQ920F6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc1bQ920F6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms