Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Mir698-201ENSMUST00000102164 109 ntBASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha9Q91Y11 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm6912-201ENSMUST00000117218 544 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm14057-201ENSMUST00000120631 482 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm8927-201ENSMUST00000181978 981 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm3222-201ENSMUST00000071282 990 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdha9Q91Y11 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Gm13385-201ENSMUST00000121089 220 ntBASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Gm14719-201ENSMUST00000121891 340 ntBASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms