Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb18Q91Y02 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Gm18307-201ENSMUST00000206864 949 ntBASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb18Q91Y02 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Mir7085-201ENSMUST00000184353 66 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Mir7654-201ENSMUST00000185082 70 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 Gm5035-201ENSMUST00000215581 927 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb18Q91Y02 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms