Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pck2-205ENSMUST00000226352 2784 ntBASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb3Q91XZ7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm35638-201ENSMUST00000220724 652 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb3Q91XZ7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms