Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Gm13453-201ENSMUST00000118708 357 ntBASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb6Q91XZ4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb6Q91XZ4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb6Q91XZ4 Gm10766-202ENSMUST00000194123 606 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms