Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb8Q91XZ2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Gm9719-201ENSMUST00000162765 543 ntBASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb8Q91XZ2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm5566-201ENSMUST00000116118 459 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm27702-201ENSMUST00000184512 56 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Mir125a-201ENSMUST00000083545 68 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb8Q91XZ2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms