Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx1Q91VR5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.46□□□□□ -0.1
Ddx1Q91VR5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx1Q91VR5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx1Q91VR5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx1Q91VR5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.46□□□□□ -0.1
Ddx1Q91VR5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm12091-201ENSMUST00000146791 830 ntBASIC14.45□□□□□ -0.1
Ddx1Q91VR5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx1Q91VR5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Gm27533-201ENSMUST00000183800 152 ntBASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Gm43630-201ENSMUST00000201550 776 ntBASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ddx1Q91VR5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms