Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm26399-201ENSMUST00000103937 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25349-201ENSMUST00000177728 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm23616-201ENSMUST00000177797 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25871-201ENSMUST00000177816 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm24752-201ENSMUST00000178240 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm24496-201ENSMUST00000178287 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25649-201ENSMUST00000178476 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25548-201ENSMUST00000178681 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm23147-201ENSMUST00000178841 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm26095-201ENSMUST00000179270 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm22171-201ENSMUST00000179283 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm23936-201ENSMUST00000179354 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm22619-201ENSMUST00000179516 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25255-201ENSMUST00000179579 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm24755-201ENSMUST00000179691 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm26506-201ENSMUST00000179692 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm25086-201ENSMUST00000179931 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm23243-201ENSMUST00000180047 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm24659-201ENSMUST00000180212 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm24169-201ENSMUST00000180244 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm23689-201ENSMUST00000180354 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm27359-201ENSMUST00000184153 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm27785-201ENSMUST00000184268 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm27466-201ENSMUST00000184396 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm27703-201ENSMUST00000184836 110 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.58□□□□□ -0.4
Odf4Q8VI88 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Odf4Q8VI88 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gm16026-204ENSMUST00000162652 683 ntBASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.57□□□□□ -0.4
Odf4Q8VI88 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Odf4Q8VI88 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Odf4Q8VI88 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.56□□□□□ -0.4
Odf4Q8VI88 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Odf4Q8VI88 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms