Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm45098-201ENSMUST00000207179 657 ntBASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa1Q8VEE4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm6754-201ENSMUST00000117124 913 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm27741-201ENSMUST00000185060 237 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm6550-201ENSMUST00000187574 993 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms