Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm8749-201ENSMUST00000117737 331 ntBASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm11745-201ENSMUST00000121669 448 ntBASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Mir6990-201ENSMUST00000183724 91 ntBASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf8Q8VC56 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.51□□□□□ -0.25
Rnf8Q8VC56 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf8Q8VC56 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm2810-201ENSMUST00000118681 990 ntBASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm13365-201ENSMUST00000121188 973 ntBASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm5312-201ENSMUST00000203728 547 ntBASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms