Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc9Q8VC31 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm40377-201ENSMUST00000204604 2015 ntBASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc9Q8VC31 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gm27704-201ENSMUST00000185094 107 ntBASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc9Q8VC31 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 CT025678.1-201ENSMUST00000214795 2972 ntBASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms