Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps39Q8R5L3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps39Q8R5L3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gm13365-201ENSMUST00000121188 973 ntBASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps39Q8R5L3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.01□□□□□ -0.17
Vps39Q8R5L3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps39Q8R5L3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms