Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Slf1Q8R3P9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.13□□□□□ -0.15
Slf1Q8R3P9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slf1Q8R3P9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.12□□□□□ -0.15
Slf1Q8R3P9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.12□□□□□ -0.15
Slf1Q8R3P9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.12□□□□□ -0.15
Slf1Q8R3P9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.12□□□□□ -0.15
Slf1Q8R3P9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slf1Q8R3P9 Pck2-205ENSMUST00000226352 2784 ntBASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slf1Q8R3P9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms