Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp40Q8R1F9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp40Q8R1F9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp40Q8R1F9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Gm18905-201ENSMUST00000205454 928 ntBASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms