Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sf3a1Q8K4Z5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Gm15393-201ENSMUST00000120499 219 ntBASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Gm15487-201ENSMUST00000122373 465 ntBASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sf3a1Q8K4Z5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Gm12585-201ENSMUST00000117307 290 ntBASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Gm21470-201ENSMUST00000187680 696 ntBASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Sf3a1Q8K4Z5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Gm25925-201ENSMUST00000158314 306 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms