Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx54Q8K4L0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Gm14263-201ENSMUST00000117955 746 ntBASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Gm29608-201ENSMUST00000190444 463 ntBASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Gm7046-201ENSMUST00000221351 977 ntBASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx54Q8K4L0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Gm24990-201ENSMUST00000157406 323 ntBASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Gm24514-201ENSMUST00000174961 285 ntBASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx54Q8K4L0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx54Q8K4L0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ddx54Q8K4L0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx54Q8K4L0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx54Q8K4L0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Gm6015-201ENSMUST00000217493 1586 ntBASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx54Q8K4L0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms