Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Acot6-202ENSMUST00000222921 3622 ntBASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm27680-201ENSMUST00000184192 160 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm38294-201ENSMUST00000192831 381 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm44608-201ENSMUST00000206827 855 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm6888-201ENSMUST00000221983 706 ntBASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfwd3Q8CIK8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms