Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Mir497b-201ENSMUST00000093601 125 ntBASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox30Q8CGW4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Gm12428-201ENSMUST00000119844 727 ntBASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox30Q8CGW4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox30Q8CGW4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Mir698-201ENSMUST00000102164 109 ntBASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Gm18049-201ENSMUST00000208909 581 ntBASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms