Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm12896-201ENSMUST00000118430 226 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm8825-201ENSMUST00000182565 998 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm4518-201ENSMUST00000182638 718 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm9726-201ENSMUST00000180321 678 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.53□□□□□ -0.72
Hist3h2bbQ8CGP0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.72
Hist3h2bbQ8CGP0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms