Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ShfQ8CG80 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ShfQ8CG80 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Rprl2-201ENSMUST00000157150 290 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 Gm29741-201ENSMUST00000192667 421 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Gm18027-201ENSMUST00000218947 619 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Gm10175-201ENSMUST00000086013 645 ntBASIC12.47□□□□□ -0.41
ShfQ8CG80 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.47□□□□□ -0.41
ShfQ8CG80 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ShfQ8CG80 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
ShfQ8CG80 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ShfQ8CG80 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ShfQ8CG80 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.46□□□□□ -0.41
ShfQ8CG80 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.46□□□□□ -0.41
ShfQ8CG80 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.46□□□□□ -0.41
ShfQ8CG80 Gm18049-201ENSMUST00000208909 581 ntBASIC12.46□□□□□ -0.41
ShfQ8CG80 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ShfQ8CG80 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.46□□□□□ -0.42
ShfQ8CG80 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ShfQ8CG80 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ShfQ8CG80 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
ShfQ8CG80 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
ShfQ8CG80 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ShfQ8CG80 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ShfQ8CG80 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.45□□□□□ -0.42
ShfQ8CG80 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ShfQ8CG80 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ShfQ8CG80 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms