Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm8927-201ENSMUST00000181978 981 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm27772-201ENSMUST00000184900 187 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm43094-201ENSMUST00000196549 921 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Gm3222-201ENSMUST00000071282 990 ntBASIC13.63□□□□□ -0.23
Rab43Q8CG50 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab43Q8CG50 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.62□□□□□ -0.23
Rab43Q8CG50 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Mir1938-201ENSMUST00000158746 100 ntBASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gm27486-201ENSMUST00000184923 80 ntBASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.62□□□□□ -0.23
Rab43Q8CG50 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab43Q8CG50 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.61□□□□□ -0.23
Rab43Q8CG50 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm15429-201ENSMUST00000151268 798 ntBASIC13.61□□□□□ -0.23
Rab43Q8CG50 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms