Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lrif1Q8CDD9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lrif1Q8CDD9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lrif1Q8CDD9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lrif1Q8CDD9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lrif1Q8CDD9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm5177-201ENSMUST00000183092 997 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Thap2-203ENSMUST00000218989 527 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lrif1Q8CDD9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Gm13597-201ENSMUST00000121239 375 ntBASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Gm44492-201ENSMUST00000197012 141 ntBASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lrif1Q8CDD9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms